gene detail

Gene description

RAP-DB: OS12G0279000

Short description: Helicase, C-terminal domain containing protein.

Orthologous

Arabidopsis: No orthologous

Maize:

GRMZM2G040995

Wheat: No orthologous

GO biological process

unknown

GO cellular component

unknown

GO molecular function

nucleic acid binding (GO:0003676), helicase activity (GO:0004386), ATP binding (GO:0005524), hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (GO:0016818)

Protein domain

Pfam	PF00271, Helicase conserved C-terminal domain
Pfam	PF08148, DSHCT (NUC185) domain
Pfam	PF13234, rRNA-processing arch domain
SMART	SM01142, DSHCT
SMART	SM00490, HELICc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:dosa03018: RNA degradation

Coexpression network

GSE62894_S_77  view
GSE63047_T7174R  view
GSE62893_S_15B  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62893_R_15B  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain BLS303	-3.33	9.60E-05
GSE62893	Nipponbare, Pia, water 2 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d	2.12	5.57E-03
GSE62893	Nipponbare, pia, water 2 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 2 d	1.69	3.87E-02
GSE62894	Nipponbare, Pish, water 2 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d	1.79	1.96E-03
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-2.60	1.84E-06
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-1.77	2.82E-03
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-2.01	1.65E-03