gene detail

Gene description

Short description: Similar to ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (Fragment).

Orthologous

Arabidopsis:

AT5G50920

Maize:

GRMZM2G009443

Wheat:

TAAFFX.79938.1.S1_AT

GO biological process

nucleotide-excision repair (GO:0006289), protein metabolic process (GO:0019538)

GO cellular component

unknown

GO molecular function

nucleotide binding (GO:0000166), DNA binding (GO:0003677), nuclease activity (GO:0004518), ATP binding (GO:0005524), nucleoside-triphosphatase activity (GO:0017111)

Protein domain

Pfam	PF02861, Clp amino terminal domain, pathogenicity island component
Pfam	PF00004, ATPase family associated with various cellular activities (AAA)
Pfam	PF07724, AAA domain (Cdc48 subfamily)
Pfam	PF10431, C-terminal, D2-small domain, of ClpB protein
Pfam	PF02151, UvrB/uvrC motif
SMART	SM01086, ClpB_D2-small
SMART	SM00382, AAA

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62893_R_15B  view
GSE33411_IR24  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-2.07	2.51E-06