gene detail

Gene description

RAP-DB: OS11G0572100

Short description: Similar to DNA ligase (EC 6.5.1.2).

Orthologous

Arabidopsis:

AT1G77620

Maize:

GRMZM2G457381

Wheat:

TA.7397.1.A1_S_AT

GO biological process

DNA replication (GO:0006260)

GO cellular component

intracellular (GO:0005622), DNA replication factor C complex (GO:0005663)

GO molecular function

nucleotide binding (GO:0000166), DNA binding (GO:0003677), DNA clamp loader activity (GO:0003689), ATP binding (GO:0005524), nucleoside-triphosphatase activity (GO:0017111)

Protein domain

Pfam	PF00004, ATPase family associated with various cellular activities (AAA)
Pfam	PF00533, BRCA1 C Terminus (BRCT) domain
Pfam	PF08519, Replication factor RFC1 C terminal domain
SMART	SM00292, BRCT
SMART	SM00382, AAA

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:dosa03030: DNA replication
PATH:dosa03420: Nucleotide excision repair
PATH:dosa03430: Mismatch repair

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE33411_IR24  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-2.70	1.23E-07