gene detail

Gene description

Short description: Similar to Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (10-formyletrahydrofolate synthetase) (FHS) (FTHFS).

Orthologous

Arabidopsis: No orthologous

Maize:

GRMZM5G824944

Wheat: No orthologous

GO biological process

folic acid-containing compound biosynthetic process (GO:0009396)

GO cellular component

unknown

GO molecular function

formate-tetrahydrofolate ligase activity (GO:0004329), ATP binding (GO:0005524)

Protein domain

Pfam	PF01268, Formate--tetrahydrofolate ligase

Metabolic pathway

PWY-3841: folate transformations II
PWY-2161: folate polyglutamylation

KEGG pathway

PATH:dosa01200: Carbon metabolism
PATH:dosa00670: One carbon pool by folate

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62893_R_15B  view
GSE33411_IR24  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

17 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE19239	Japonica 9804, Rxo1, control	Japonica 9804, Rxo1, X. oryzae pv. oryzicola	1.53	1.25E-07
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO86	-1.82	9.69E-05
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain _PXO99A	-2.91	6.37E-09
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME1	-2.61	9.69E-08
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME5	-3.04	2.64E-09
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99A_2	-2.34	5.19E-07
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain T7174	-2.22	5.75E-06
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain _PXO99A	-1.84	1.08E-04
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME1	-2.46	2.37E-07
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME2	-2.64	6.45E-08
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME5	-2.08	1.48E-05
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME7	-1.53	3.41E-03
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99A_2	-2.26	1.23E-06
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain T7174	-2.67	7.21E-08
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-6.14	3.73E-11
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	-3.17	2.10E-13
GSE7256	Nipponbare, Mock 4 d	Nipponbare, Magnaporthe grisea FR13 5 d	-2.10	1.47E-02