gene detail

Gene description

RAP-DB: OS08G0416100

Short description: DEAD-like helicase, N-terminal domain containing protein.

Orthologous

Arabidopsis:

AT1G77030

Maize: No orthologous

Wheat: No orthologous

GO biological process

unknown

GO cellular component

nucleus (GO:0005634)

GO molecular function

nucleic acid binding (GO:0003676), RNA binding (GO:0003723), helicase activity (GO:0004386), ATP binding (GO:0005524), ATP-dependent helicase activity (GO:0008026), hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (GO:0016818)

Protein domain

Pfam	PF00271, Helicase conserved C-terminal domain
Pfam	PF00270, DEAD/DEAH box helicase
Pfam	PF08147, DBP10CT (NUC160) domain
SMART	SM00490, HELICc
SMART	SM01123, DBP10CT
SMART	SM00487, DEXDc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE62894_S_77  view
GSE33411_IRBB7  view
GSE63047_T7174R  view
GSE62893_S_15B  view
GSE62895_R_15B_ROOT  view
GSE62893_R_15B  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-2.80	2.17E-07
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-2.96	1.21E-02
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-3.79	7.01E-03
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-3.14	7.99E-03