gene detail

Gene description

RAP-DB: OS08G0175300

Short description: PolI-like DNA polymerase.

Orthologous

Arabidopsis:

AT1G50840

Maize:

GRMZM2G480171

Wheat: No orthologous

GO biological process

nucleobase-containing compound metabolic process (GO:0006139), DNA replication (GO:0006260)

GO cellular component

intracellular (GO:0005622)

GO molecular function

nucleic acid binding (GO:0003676), DNA binding (GO:0003677), DNA-directed DNA polymerase activity (GO:0003887), 3'-5' exonuclease activity (GO:0008408)

Protein domain

Pfam	PF01612, 3'-5' exonuclease
Pfam	PF00476, DNA polymerase family A
SMART	SM00482, POLAc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:dosa00230: Purine metabolism
PATH:dosa00240: Pyrimidine metabolism
PATH:dosa03030: DNA replication
PATH:dosa03410: Base excision repair
PATH:dosa03420: Nucleotide excision repair
PATH:dosa03440: Homologous recombination

Coexpression network

GSE63047_T7174R  view
GSE62893_S_15B  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62895_R_15B_ROOT  view
GSE62893_R_15B  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE19239	Japonica 9804, Rxo1, control	Japonica 9804, Rxo1, X. oryzae pv. oryzicola	2.01	1.06E-05
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 12 h	2.73	4.03E-02
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 3 h	2.91	3.40E-02
GSE62894	Nipponbare, Pish, water 2 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d	1.55	4.27E-02
GSE62894	Nipponbare, Pish, water 3 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 3 d	1.81	1.78E-02
GSE62894	Nipponbare, pish, water 2 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 2 d	2.58	2.34E-03
GSE62894	Nipponbare, pish, water 3 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 3 d	2.52	1.05E-03
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-2.13	1.28E-03
GSE7256	Nipponbare, Mock 4 d	Nipponbare, Magnaporthe grisea FR13 5 d	2.32	2.14E-03