gene detail

Gene description

RAP-DB: OS08G0120000

Short description: Succinate dehydrogenase iron-protein subunit (SDHB).

Orthologous

Arabidopsis: No orthologous

Maize:

GRMZM2G134134

Wheat: No orthologous

GO biological process

tricarboxylic acid cycle (GO:0006099), oxidation-reduction process (GO:0055114), translation (GO:0006412)

GO cellular component

intracellular (GO:0005622), ribosome (GO:0005840)

GO molecular function

electron carrier activity (GO:0009055), oxidoreductase activity (GO:0016491), iron-sulfur cluster binding (GO:0051536), 2 iron, 2 sulfur cluster binding (GO:0051537), structural constituent of ribosome (GO:0003735)

Protein domain

Pfam	PF00253, Ribosomal protein S14p/S29e
Pfam	PF13534, 4Fe-4S dicluster domain
Pfam	PF13085, 2Fe-2S iron-sulfur cluster binding domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:dosa01200: Carbon metabolism
PATH:dosa00020: Citrate cycle (TCA cycle)
PATH:dosa00190: Oxidative phosphorylation

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62894_R_77  view
GSE33411_IR24  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62893	Nipponbare, Pia, water 2 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d	2.22	6.01E-03
GSE62893	Nipponbare, pia, water 2 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 2 d	1.75	4.24E-02
GSE62894	Nipponbare, Pish, water 2 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d	2.18	8.77E-04
GSE62894	Nipponbare, Pish, water 3 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 3 d	1.64	1.12E-02
GSE62894	Nipponbare, pish, water 3 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 3 d	1.54	1.65E-02
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-3.86	1.79E-03
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-3.52	8.78E-03
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-3.16	6.68E-03