gene detail

Gene description

RAP-DB: OS06G0168500

Short description: Similar to Syntaxin-like protein (Fragment).

Orthologous

Arabidopsis: No orthologous

Maize:

GRMZM2G021378

Wheat:

TA.5302.1.S1_AT

GO biological process

intracellular protein transport (GO:0006886), vesicle-mediated transport (GO:0016192)

GO cellular component

membrane (GO:0016020)

GO molecular function

SNAP receptor activity (GO:0005484), protein binding (GO:0005515)

Protein domain

Pfam	PF00804, Syntaxin
Pfam	PF05739, SNARE domain
SMART	SM00397, t_SNARE
SMART	SM00503, SynN

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:dosa04130: SNARE interactions in vesicular transport

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62894_R_77  view
GSE33411_IR24  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

24 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE19239	Japonica 9804, Rxo1, control	Japonica 9804, Rxo1, X. oryzae pv. oryzicola	1.84	3.27E-07
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 12 h	2.22	1.34E-08
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 3 h	1.58	7.65E-06
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 12 h	2.63	4.67E-10
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 3 h	2.14	4.02E-08
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 12 h	2.26	9.19E-09
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 3 h	1.97	1.82E-07
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO86	2.11	6.19E-08
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME5	1.95	1.01E-07
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99A_2	1.55	6.61E-06
GSE62893	Nipponbare, Pia, water 2 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d	4.12	3.23E-06
GSE62893	Nipponbare, pia, water 2 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 2 d	3.38	1.04E-04
GSE62893	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	4.23	2.68E-06
GSE62894	Nipponbare, Pish, water 2 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d	3.94	4.73E-07
GSE62894	Nipponbare, Pish, water 3 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 3 d	3.77	1.14E-06
GSE62894	Nipponbare, Pish, water 5 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 5 d	2.79	1.05E-04
GSE62894	Nipponbare, pish, water 2 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 2 d	2.83	3.14E-04
GSE62894	Nipponbare, pish, water 3 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 3 d	4.22	1.48E-07
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	1.77	2.90E-03
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-1.52	4.78E-03
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-1.55	3.86E-03
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-1.84	1.66E-03
GSE7256	Nipponbare, Mock 3 d	Nipponbare, Magnaporthe grisea FR13 3 d	2.17	4.50E-03
GSE7256	Nipponbare, Mock 4 d	Nipponbare, Magnaporthe grisea FR13 5 d	3.06	2.49E-04