gene detail

Gene description

RAP-DB: OS06G0151600

Short description: DNA repair protein RadA family protein.

Orthologous

Arabidopsis: No orthologous

Maize:

GRMZM2G062638

Wheat:

TA.6171.1.S1_AT

GO biological process

DNA repair (GO:0006281), proteolysis (GO:0006508)

GO cellular component

unknown

GO molecular function

nucleotide binding (GO:0000166), damaged DNA binding (GO:0003684), ATP-dependent peptidase activity (GO:0004176), serine-type endopeptidase activity (GO:0004252), ATP binding (GO:0005524), nucleoside-triphosphatase activity (GO:0017111)

Protein domain

Pfam	PF13541, Subunit ChlI of Mg-chelatase
Pfam	PF13481, AAA domain
SMART	SM00382, AAA

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62893_R_15B  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 3 h	1.52	1.00E-06
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 3 h	1.60	3.54E-07
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-4.31	1.54E-09
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-2.67	7.95E-03
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-2.30	2.94E-02
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-2.46	1.24E-02