Gene: OS05G0540100
Gene description
RAP-DB: OS05G0540100
Short description: Flap endonuclease-1a (EC 3.-.-.-) (OsFEN-1a).
GO biological process
DNA repair (GO:0006281)
GO cellular component
unknown
GO molecular function
DNA binding (GO:0003677), catalytic activity (GO:0003824), nuclease activity (GO:0004518), hydrolase activity, acting on ester bonds (GO:0016788)
Protein domain
| Pfam | PF00752, XPG N-terminal domain |
| Pfam | PF00867, XPG I-region |
| SMART | SM00279, HhH2 |
| SMART | SM00475, 53EXOc |
| SMART | SM00484, XPGI |
| SMART | SM00485, XPGN |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
PATH:dosa03030: DNA replication
PATH:dosa03410: Base excision repair
PATH:dosa03450: Non-homologous end-joining
Coexpression network
Differentially expressed condition 
9 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE36272 | IR24, MOCK | IR24, Xanthomonas oryzae strain _PXO99A | -2.20 | 4.25E-02 |
| GSE62893 | Nipponbare, Pia, water 2 d | Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d | 1.83 | 3.03E-02 |
| GSE62894 | Nipponbare, Pish, water 2 d | Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d | 1.99 | 4.99E-03 |
| GSE62894 | Nipponbare, pish, water 5 d | Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d | -5.39 | 5.99E-11 |
| GSE62895 | Nipponbare, Pia, water 2 d | Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d | -1.76 | 4.33E-02 |
| GSE62895 | Nipponbare, Pia, water 3 d | Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d | -2.48 | 2.19E-03 |
| GSE62895 | Nipponbare, Pia, water 5 d | Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d | -2.09 | 1.41E-02 |
| GSE62895 | Nipponbare, pia, water 3 d | Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d | -2.51 | 1.97E-03 |
| GSE62895 | Nipponbare, pia, water 5 d | Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d | -2.15 | 7.59E-03 |
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