gene detail

Gene description

RAP-DB: OS04G0605500

Short description: P-type IIB Ca(2+) ATPase, Stress tolerance

Orthologous

Arabidopsis:

AT3G22910

Maize:

GRMZM2G391042 GRMZM5G893864

Wheat:

TA.4760.1.S1_AT TA.4760.1.S1_X_AT

GO biological process

calcium ion transmembrane transport (GO:0070588), ATP biosynthetic process (GO:0006754), cation transport (GO:0006812), metabolic process (GO:0008152)

GO cellular component

membrane (GO:0016020), integral component of membrane (GO:0016021)

GO molecular function

nucleotide binding (GO:0000166), calcium-transporting ATPase activity (GO:0005388), calmodulin binding (GO:0005516), ATP binding (GO:0005524), metal ion binding (GO:0046872), catalytic activity (GO:0003824), ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism (GO:0015662), hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances (GO:0016820)

Protein domain

Pfam	PF13246, Cation transport ATPase (P-type)
Pfam	PF00702, haloacid dehalogenase-like hydrolase
Pfam	PF00689, Cation transporting ATPase, C-terminus
Pfam	PF00690, Cation transporter/ATPase, N-terminus
Pfam	PF00122, E1-E2 ATPase
Pfam	PF12515, Ca2+-ATPase N terminal autoinhibitory domain
SMART	SM00831, Cation_ATPase_N

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62894_R_77  view
GSE33411_IR24  view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 3 h	-1.59	2.78E-09
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 3 h	-1.51	7.95E-09
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 3 h	-1.57	3.62E-09
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME5	1.56	1.27E-05
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-3.74	3.34E-05
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	3.60	2.41E-02
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	2.89	4.36E-02
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	4.58	4.17E-03
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	1.88	1.30E-05