gene detail

Gene description

RAP-DB: OS04G0117600

Short description: Similar to H0613H07.1 protein.

Orthologous

Arabidopsis:

AT4G38890

Maize:

GRMZM2G120740

Wheat:

TAAFFX.86796.1.S1_AT

GO biological process

tRNA processing (GO:0008033), metabolic process (GO:0008152), oxidation-reduction process (GO:0055114)

GO cellular component

unknown

GO molecular function

nucleic acid binding (GO:0003676), catalytic activity (GO:0003824), zinc ion binding (GO:0008270), tRNA dihydrouridine synthase activity (GO:0017150), flavin adenine dinucleotide binding (GO:0050660)

Protein domain

Pfam	PF01207, Dihydrouridine synthase (Dus)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE62895_S_15B_ROOT  view
GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62893_R_15B  view
GSE62895_R_15B_ROOT  view
GSE63047_DELTAHRCV  view
GSE33411_IR24  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 12 h	1.77	6.78E-12
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 3 h	1.61	8.09E-11
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 12 h	1.64	4.72E-11
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 12 h	1.56	1.15E-10
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-3.10	2.07E-07
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-3.63	1.36E-02
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-4.56	2.99E-03
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-3.48	2.09E-02