gene detail

Gene description

RAP-DB: OS03G0760700

Short description: Similar to Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (Fragment).

Orthologous

Arabidopsis:

AT1G14810

Maize:

GRMZM2G076885

Wheat: No orthologous

GO biological process

cellular amino acid metabolic process (GO:0006520), cellular amino acid biosynthetic process (GO:0008652), methionine biosynthetic process (GO:0009086), threonine biosynthetic process (GO:0009088), lysine biosynthetic process via diaminopimelate (GO:0009089), isoleucine biosynthetic process (GO:0009097), oxidation-reduction process (GO:0055114)

GO cellular component

cytoplasm (GO:0005737)

GO molecular function

nucleotide binding (GO:0000166), N-acetyl-gamma-glutamyl-phosphate reductase activity (GO:0003942), aspartate-semialdehyde dehydrogenase activity (GO:0004073), oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (GO:0016620), protein dimerization activity (GO:0046983), NADP binding (GO:0050661), NAD binding (GO:0051287)

Protein domain

Pfam	PF01118, Semialdehyde dehydrogenase, NAD binding domain
Pfam	PF02774, Semialdehyde dehydrogenase, dimerisation domain
SMART	SM00859, Semialdhyde_dh

Metabolic pathway

PWY-3001: isoleucine biosynthesis I
PWY-724: superpathway of lysine, threonine and methionine biosynthesis II
THRESYN-PWY: threonine biosynthesis
PWY-5097: lysine biosynthesis VI
HOMOSERSYN-PWY: homoserine biosynthesis

KEGG pathway

PATH:dosa01210: 2-Oxocarboxylic acid metabolism
PATH:dosa01230: Biosynthesis of amino acids
PATH:dosa00260: Glycine, serine and threonine metabolism
PATH:dosa00270: Cysteine and methionine metabolism
PATH:dosa00300: Lysine biosynthesis
PATH:dosa00261: Monobactam biosynthesis

Coexpression network

GSE62894_S_77  view
GSE33411_IRBB7  view
GSE63047_T7174R  view
GSE62893_S_15B  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE63047_DELTAHRCV  view
GSE33411_IR24  view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 3 h	1.72	3.09E-05
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain T7174	-1.62	1.21E-06
GSE62893	Nipponbare, Pia, water 2 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d	2.35	2.61E-02
GSE62894	Nipponbare, Pish, water 2 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d	2.80	1.01E-04
GSE62894	Nipponbare, Pish, water 3 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 3 d	1.72	1.35E-02
GSE62894	Nipponbare, pish, water 2 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 2 d	1.82	1.89E-02
GSE62894	Nipponbare, pish, water 3 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 3 d	2.67	2.01E-04
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-1.78	2.93E-03
GSE63047	Nipponbare, water 4 d	Nipponbare, Xanthomonas oryzae T7174R 4 d	1.95	4.04E-02
GSE7256	Nipponbare, Mock 4 d	Nipponbare, Magnaporthe grisea FR13 5 d	2.02	1.19E-03