gene detail

Gene description

RAP-DB: OS03G0748800

Short description: Similar to Helicase associated domain family protein, expressed.

Orthologous

Arabidopsis:

AT2G35920

Maize: No orthologous

Wheat: No orthologous

GO biological process

unknown

GO cellular component

intracellular (GO:0005622)

GO molecular function

nucleic acid binding (GO:0003676), RNA binding (GO:0003723), double-stranded RNA binding (GO:0003725), helicase activity (GO:0004386), ATP binding (GO:0005524), ATP-dependent helicase activity (GO:0008026)

Protein domain

Pfam	PF00270, DEAD/DEAH box helicase
Pfam	PF04408, Helicase associated domain (HA2)
Pfam	PF07717, Oligonucleotide/oligosaccharide-binding (OB)-fold
Pfam	PF00271, Helicase conserved C-terminal domain
Pfam	PF00035, Double-stranded RNA binding motif
SMART	SM00490, HELICc
SMART	SM00358, DSRM
SMART	SM00487, DEXDc
SMART	SM00847, HA2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:dosa03018: RNA degradation

Coexpression network

GSE62894_S_77  view
GSE62895_S_15B_ROOT  view
GSE63047_T7174R  view
GSE62893_S_15B  view
GSE62894_R_77  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-3.10	2.17E-08