gene detail

Gene description

Short description: Similar to Activator 1 36 kDa subunit (Replication factor C 36 kDa subunit) (A1 36 kDa subunit) (RF-C 36 kDa subunit) (RFC36) (Replication factor C subunit 5).

Orthologous

Arabidopsis:

AT1G21690

Maize:

GRMZM2G126292

Wheat:

TAAFFX.88477.1.S1_AT

GO biological process

DNA replication (GO:0006260)

GO cellular component

DNA replication factor C complex (GO:0005663)

GO molecular function

nucleotide binding (GO:0000166), DNA binding (GO:0003677), DNA clamp loader activity (GO:0003689), ATP binding (GO:0005524), nucleoside-triphosphatase activity (GO:0017111)

Protein domain

Pfam	PF08542, Replication factor C C-terminal domain
Pfam	PF00004, ATPase family associated with various cellular activities (AAA)
SMART	SM00382, AAA

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:dosa03030: DNA replication
PATH:dosa03420: Nucleotide excision repair
PATH:dosa03430: Mismatch repair

Coexpression network

GSE62895_S_15B_ROOT  view
GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62895_R_15B_ROOT  view
GSE63047_DELTAHRCV  view
GSE33411_IR24  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-2.98	2.78E-07
GSE62895	Nipponbare, Pia, water 2 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d	-2.93	2.24E-02
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-3.43	1.48E-03
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-3.09	8.36E-03
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-3.79	6.89E-04
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-3.05	4.46E-03