gene detail

Gene description

RAP-DB: OS02G0744900

Short description: Similar to Geranylgeranyl reductase (Fragment).

Orthologous

Arabidopsis: No orthologous

Maize:

GRMZM2G105644

Wheat: No orthologous

GO biological process

metabolic process (GO:0008152), photosynthesis (GO:0015979), chlorophyll biosynthetic process (GO:0015995), cofactor biosynthetic process (GO:0051188), oxidation-reduction process (GO:0055114)

GO cellular component

unknown

GO molecular function

nucleotide binding (GO:0000166), oxidoreductase activity (GO:0016491), oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (GO:0016628), geranylgeranyl reductase activity (GO:0045550)

Protein domain

Pfam	PF01494, FAD binding domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:dosa00860: Porphyrin and chlorophyll metabolism
PATH:dosa00900: Terpenoid backbone biosynthesis

Coexpression network

GSE62895_S_15B_ROOT  view
GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62893_R_15B  view
GSE62895_R_15B_ROOT  view
GSE62894_R_77  view
GSE63047_DELTAHRCV  view
GSE33411_IR24  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 12 h	-2.84	1.77E-16
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 12 h	-2.91	1.06E-16
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 12 h	-2.83	1.95E-16
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain _PXO99A	-1.50	2.14E-05
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-3.87	1.22E-05
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	-2.88	4.94E-10