gene detail

Gene description

RAP-DB: OS02G0595500

Short description: Similar to NAD-dependent isocitrate dehydrogenase precursor (EC 1.1.1.41).

Orthologous

Arabidopsis:

AT5G03290

Maize:

GRMZM2G006672

Wheat: No orthologous

GO biological process

tricarboxylic acid cycle (GO:0006099), oxidation-reduction process (GO:0055114)

GO cellular component

unknown

GO molecular function

magnesium ion binding (GO:0000287), isocitrate dehydrogenase (NAD+) activity (GO:0004449), oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), NAD binding (GO:0051287)

Protein domain

Pfam	PF00180, Isocitrate/isopropylmalate dehydrogenase
SMART	SM01329, Iso_dh

Metabolic pathway

PWY-6549: glutamine biosynthesis III
PWY-5690: TCA cycle II (plants and fungi)
PWY-5464: superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle

KEGG pathway

PATH:dosa01200: Carbon metabolism
PATH:dosa01210: 2-Oxocarboxylic acid metabolism
PATH:dosa01230: Biosynthesis of amino acids
PATH:dosa00020: Citrate cycle (TCA cycle)

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE33411_IR24  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-3.01	4.18E-08