gene detail

Gene description

Short description: Similar to Riboflavin biosynthesis protein ribA, chloroplast precursor [Includes: GTP cyclohydrolase II (EC 3.5.4.25); 3,4-dihydroxy-2-butanone 4- phosphate synthase (DHBP synthase)].

Orthologous

Arabidopsis: No orthologous

Maize:

GRMZM2G105466

Wheat:

TAAFFX.41970.1.S1_AT TAAFFX.41970.1.S1_S_AT

GO biological process

riboflavin biosynthetic process (GO:0009231)

GO cellular component

unknown

GO molecular function

GTP cyclohydrolase II activity (GO:0003935), 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (GO:0008686)

Protein domain

Pfam	PF00926, 3,4-dihydroxy-2-butanone 4-phosphate synthase
Pfam	PF00925, GTP cyclohydrolase II

Metabolic pathway

RIBOSYN2-PWY: flavin biosynthesis I (bacteria and plants)

KEGG pathway

PATH:dosa00740: Riboflavin metabolism

Coexpression network

GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE16793_XOO  view
GSE63047_DELTAHRCV  view
GSE33411_IR24  view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18361	Nipponbare, Mock 2 d	Nipponbare, Magnaporthe oryzae strain Guy11 2 d	1.94	9.25E-06
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 3 h	-1.75	2.37E-07
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 3 h	-1.55	2.10E-06
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 6 h	-1.70	1.13E-06
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 3 h	-1.53	2.23E-06
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain BLS303	1.50	6.91E-05
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME2	1.65	3.23E-05
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain BLS303	-1.50	1.36E-04
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-3.24	5.35E-05
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-1.76	5.62E-03
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-1.52	2.31E-02
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-1.90	3.30E-03
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-1.57	1.43E-02
GSE63337	Nipponbare, Osaba1_1, Xanthomonas oryzae pv. Oryzae PXO99 0 h	Nipponbare, Osaba1_1, Xanthomonas oryzae pv. Oryzae PXO99 72 h	-1.78	2.67E-04
GSE7256	Nipponbare, Mock 4 d	Nipponbare, Magnaporthe grisea FR13 5 d	1.98	7.28E-03