gene detail

Gene description

RAP-DB: OS01G0654500

Short description: Similar to NADP-isocitrate dehydrogenase.

Orthologous

Arabidopsis:

AT1G65930

Maize:

GRMZM2G033515

Wheat: No orthologous

GO biological process

isocitrate metabolic process (GO:0006102), oxidation-reduction process (GO:0055114)

GO cellular component

unknown

GO molecular function

magnesium ion binding (GO:0000287), isocitrate dehydrogenase (NADP+) activity (GO:0004450), oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), NAD binding (GO:0051287)

Protein domain

Pfam	PF00180, Isocitrate/isopropylmalate dehydrogenase
SMART	SM01329, Iso_dh

Metabolic pathway

PWY-6549: glutamine biosynthesis III

KEGG pathway

PATH:dosa01200: Carbon metabolism
PATH:dosa01210: 2-Oxocarboxylic acid metabolism
PATH:dosa01230: Biosynthesis of amino acids
PATH:dosa00020: Citrate cycle (TCA cycle)
PATH:dosa00480: Glutathione metabolism
PATH:dosa04146: Peroxisome

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62894_R_77  view
GSE33411_IR24  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

12 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 3 h	1.70	4.79E-12
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 3 h	1.57	3.02E-11
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 3 h	1.52	4.96E-11
GSE62893	Nipponbare, Pia, water 2 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d	2.53	2.15E-03
GSE62893	Nipponbare, pia, water 2 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 2 d	2.21	1.05E-02
GSE62893	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	2.48	2.97E-03
GSE62894	Nipponbare, Pish, water 2 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d	2.69	4.88E-05
GSE62894	Nipponbare, Pish, water 3 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 3 d	2.61	9.19E-05
GSE62894	Nipponbare, Pish, water 5 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 5 d	2.51	1.38E-04
GSE62894	Nipponbare, pish, water 3 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 3 d	2.40	2.45E-04
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-1.51	1.10E-02
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	1.61	4.51E-04