gene detail

Gene description

Short description: DEAD box RNA helicase homologous to eukaryotic initiation factor 4AIII (eIF4AIII), Core components of the exon junction complex (EJC), Regulation of plant height, pollen, and seed development

Orthologous

Arabidopsis:

AT3G22330

Maize:

GRMZM2G018947

Wheat: No orthologous

GO biological process

unknown

GO cellular component

unknown

GO molecular function

nucleic acid binding (GO:0003676), ATP binding (GO:0005524)

Protein domain

Pfam	PF00271, Helicase conserved C-terminal domain
Pfam	PF00270, DEAD/DEAH box helicase
SMART	SM00490, HELICc
SMART	SM00487, DEXDc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:dosa03040: Spliceosome
PATH:dosa03013: RNA transport
PATH:dosa03015: mRNA surveillance pathway

Coexpression network

GSE62894_S_77  view
GSE63047_T7174R  view
GSE62893_S_15B  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-3.66	7.97E-10
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-3.44	4.40E-02
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-3.99	2.61E-02