gene detail

Gene description

RAP-DB: OS01G0618400

Short description: Similar to RNA helicase (Fragment).

Orthologous

Arabidopsis:

AT2G07750

Maize:

GRMZM2G026371

Wheat:

TAAFFX.4739.1.S1_AT

GO biological process

unknown

GO cellular component

unknown

GO molecular function

nucleic acid binding (GO:0003676), helicase activity (GO:0004386), ATP binding (GO:0005524), ATP-dependent helicase activity (GO:0008026)

Protein domain

Pfam	PF00271, Helicase conserved C-terminal domain
Pfam	PF00270, DEAD/DEAH box helicase
SMART	SM00487, DEXDc
SMART	SM00490, HELICc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62893_R_15B  view
GSE62894_R_77  view
GSE33411_IR24  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

24 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 12 h	1.97	1.78E-06
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 3 h	1.57	7.53E-05
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 12 h	1.89	3.79E-06
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 12 h	2.34	8.61E-08
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 3 h	1.67	3.09E-05
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain BLS303	-2.26	4.70E-04
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO86	-2.60	1.28E-04
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain _PXO99A	-2.72	2.55E-05
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME1	-3.05	7.03E-06
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME2	-2.60	1.21E-04
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME5	-3.05	4.07E-06
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99A_2	-2.80	1.65E-05
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain T7174	-2.24	9.88E-04
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain BLS303	-2.19	1.10E-03
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain _PXO99A	-2.09	2.05E-03
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME1	-3.09	4.43E-06
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME2	-2.77	3.18E-05
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME5	-2.21	9.62E-04
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME7	-1.83	1.71E-02
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99A_2	-3.42	6.08E-07
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain T7174	-3.02	7.85E-06
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-5.35	4.29E-07
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	-1.81	8.71E-03
GSE63337	Nipponbare, Osaba1_1, Xanthomonas oryzae pv. Oryzae PXO99 0 h	Nipponbare, Osaba1_1, Xanthomonas oryzae pv. Oryzae PXO99 72 h	-1.87	5.24E-05