gene detail

Gene description

RAP-DB: OS01G0581300

Short description: Similar to Lycopene epsilon-cyclase (Fragment).

Orthologous

Arabidopsis:

Maize: No orthologous

Wheat: No orthologous

GO biological process

carotenoid biosynthetic process (GO:0016117)

GO cellular component

unknown

GO molecular function

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)

Protein domain

Pfam	PF05834, Lycopene cyclase protein

Metabolic pathway

KEGG pathway

PATH:dosa00906: Carotenoid biosynthesis

Coexpression network

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO86	-2.14	3.11E-04
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain _PXO99A	-2.92	9.53E-07
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME5	-2.06	2.09E-04
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99A_2	-2.45	1.97E-05
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-6.16	1.93E-09
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	-3.02	1.27E-05
GSE7256	Nipponbare, Mock 4 d	Nipponbare, Magnaporthe grisea FR13 5 d	-1.96	3.58E-03