gene detail

Gene description

RAP-DB: OS01G0268300

Short description: Similar to DNA gyrase B subunit.

Orthologous

Arabidopsis:

AT5G04130

Maize:

GRMZM2G111014

Wheat:

TAAFFX.105963.1.S1_AT

GO biological process

DNA topological change (GO:0006265)

GO cellular component

chromosome (GO:0005694)

GO molecular function

DNA binding (GO:0003677), DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918), ATP binding (GO:0005524)

Protein domain

Pfam	PF01751, Toprim domain
Pfam	PF00986, DNA gyrase B subunit, carboxyl terminus
Pfam	PF02518, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Pfam	PF00204, DNA gyrase B
SMART	SM00387, HATPase_c
SMART	SM00433, TOP2c

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE62895_S_15B_ROOT  view
GSE63047_T7174R  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62893_R_15B  view
GSE62894_R_77  view
GSE63047_DELTAHRCV  view
GSE33411_IR24  view

Differentially expressed condition

18 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain _PXO99A	-1.95	8.58E-05
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME1	-1.93	1.62E-04
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME5	-2.39	3.87E-06
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99A_2	-2.13	2.48E-05
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain BLS303	-1.70	1.12E-03
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME1	-2.29	1.12E-05
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME2	-2.24	1.73E-05
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME7	-1.57	8.49E-03
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99A_2	-2.33	7.56E-06
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain T7174	-2.82	3.26E-07
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-6.05	4.44E-11
GSE62895	Nipponbare, Pia, water 2 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d	-2.11	2.58E-02
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-2.53	1.76E-03
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-2.62	4.83E-03
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-3.17	3.17E-04
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-3.41	2.12E-04
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	-2.60	7.01E-05
GSE7256	Nipponbare, Mock 4 d	Nipponbare, Magnaporthe grisea FR13 5 d	-1.58	1.31E-02