gene detail

Gene description

RAP-DB: OS01G0227300

Short description: Similar to RAB7D.

Orthologous

Arabidopsis:

AT3G16100

Maize: No orthologous

Wheat: No orthologous

GO biological process

GTP catabolic process (GO:0006184), intracellular protein transport (GO:0006886), nucleocytoplasmic transport (GO:0006913), signal transduction (GO:0007165), small GTPase mediated signal transduction (GO:0007264), protein transport (GO:0015031)

GO cellular component

intracellular (GO:0005622), membrane (GO:0016020)

GO molecular function

GTPase activity (GO:0003924), GTP binding (GO:0005525)

Protein domain

Pfam	PF00071, Ras family
SMART	SM00176, RAN
SMART	SM00173, RAS
SMART	SM00175, RAB
SMART	SM00174, RHO

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:dosa04144: Endocytosis
PATH:dosa04145: Phagosome

Coexpression network

GSE62895_S_15B_ROOT  view
GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62893_R_15B  view
GSE62895_R_15B_ROOT  view
GSE62894_R_77  view
GSE63047_DELTAHRCV  view
GSE33411_IR24  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 12 h	-1.58	1.62E-11
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 12 h	-1.63	8.52E-12