gene detail

Gene description

RAP-DB: OS01G0172200

Short description: DNA/RNA helicase, DEAD/DEAH box type, N-terminal domain containing protein.

Orthologous

Arabidopsis: No orthologous

Maize:

GRMZM2G066440

Wheat: No orthologous

GO biological process

unknown

GO cellular component

unknown

GO molecular function

nucleic acid binding (GO:0003676), helicase activity (GO:0004386), protein binding (GO:0005515), ATP binding (GO:0005524), ATP-dependent helicase activity (GO:0008026)

Protein domain

Pfam	PF00270, DEAD/DEAH box helicase
Pfam	PF00271, Helicase conserved C-terminal domain
SMART	SM00487, DEXDc
SMART	SM00490, HELICc
SMART	SM00456, WW

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:dosa03040: Spliceosome

Coexpression network

GSE62894_S_77  view
GSE63047_T7174R  view
GSE62893_S_15B  view
GSE16793_XOO  view
GSE62894_R_77  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-3.04	1.33E-07
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-1.55	6.53E-03
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-1.52	7.06E-03
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-1.99	1.59E-03