Maize: GRMZM2G052688
     

Gene description


maizeGDB: GRMZM2G052688


Short description: ATBRCA1


Orthologous


Arabidopsis:

AT1G04020  

Rice:

OS04G0512400  

Wheat:

TA.7387.1.A1_AT  


GO biological process


DNA repair

GO cellular component


nucleus

GO molecular function


DNA binding, ubiquitin-protein transferase activity, protein binding, zinc ion binding, metal ion binding

Protein domain


PfamPF13771, PHD-like zinc-binding domain
PfamPF00533, BRCA1 C Terminus (BRCT) domain
PfamPF00097, Zinc finger, C3HC4 type (RING finger)
SMARTSM00249, PHD
SMARTSM00184, RING
SMARTSM00292, BRCT

Metabolic pathway


Not involved in metabolic pathway


Differentially expressed condition


12 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE10023Mock, 2 dSG200, 2 d1.956.66E-04
GSE10023Mock, 4.5 dSG200, 4.5 d2.504.94E-06
GSE10023Mock, 4 dSG200, 4 d3.712.26E-08
GSE10023Mock, 8 dSG200, 8 d2.253.26E-05
GSE19559Mock, 4 dSG200, 4 d3.715.67E-04
GSE19559Mock, 4 dSG200_fox1, 4 d2.682.99E-03
GSE48406Mock, 4 dSG200D19A, 4 d2.891.58E-05
GSE48406Mock, 4 dSG200Dtin1, 4 d3.311.02E-06
GSE48406Mock, 4 dSG200Dtin3, 4 d3.101.89E-06
GSE48406Mock, 4 dSG200Dtin4, 4 d2.271.02E-04
GSE48406Mock, 4 dSG200Dtin5, 4 d2.671.95E-05
GSE48406Mock, 4 dSG200, 4 d3.713.21E-07






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