Gene: AT5G67570
     

Gene description


TAIR ID: AT5G67570

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -0.98

General responsiveness: -2.19

Orthologous


Rice: No orthologous gene
Maize:

GRMZM5G884466  

Wheat: No orthologous gene

GO biological process


transcription from plastid promoter, RNA modification, chloroplast organization, embryo development ending in seed dormancy


GO cellular component


chloroplast


GO molecular function


RNA binding, protein binding, endonuclease activity


Protein domain


PfamPF13812, Pentatricopeptide repeat domain
PfamPF01535, PPR repeat
PfamPF13041, PPR repeat family

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


8 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.342.06E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.553.27E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.592.80E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h3.019.74E-13
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.813.25E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.862.07E-02
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-3.281.86E-03
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-3.321.50E-03






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