Gene: AT5G67100
     


Gene description


TAIR ID: AT5G67100

Short description: DNA-directed DNA polymerases

Pathogen responsiveness: -2.37

General responsiveness: -1.88

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G149802  

Wheat: No orthologous gene

GO biological process


DNA biosynthetic process, multicellular organism development, leading strand elongation, double-strand break repair via nonhomologous end joining, lagging strand elongation, negative regulation of flower development, leaf morphogenesis


GO cellular component


alpha DNA polymerase:primase complex, nucleus


GO molecular function


nucleotide binding, DNA-directed DNA polymerase activity, 3'-5' exonuclease activity, DNA binding, transcription factor activity, sequence-specific DNA binding, metal ion binding, nucleoside binding, 4 iron, 4 sulfur cluster binding


Protein domain


PfamPF08996, DNA Polymerase alpha zinc finger
PfamPF03104, DNA polymerase family B, exonuclease domain
PfamPF00136, DNA polymerase family B
PfamPF12254, DNA polymerase alpha subunit p180 N terminal
SMARTSM00486, POLBc

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT2G36010, AT5G02470

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.514.98E-09






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