gene detail

Gene description

TAIR ID: AT5G64760

Short description: regulatory particle non-ATPase subunit 5B

Pathogen responsiveness: -1.67

General responsiveness: -1.84

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

proteasome-mediated ubiquitin-dependent protein catabolic process, protein catabolic process, multicellular organism development, ubiquitin-dependent protein catabolic process

GO cellular component

nuclear proteasome complex, cytoplasm, proteasome regulatory particle, lid subcomplex, nucleus

GO molecular function

molecular_function

Protein domain

Pfam	PF01399, PCI domain
SMART	SM00088, PINT
SMART	SM00753, PAM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03050: Proteasome

Transcriptional regulation

Regulator:
AT2G38250

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.82	1.19E-06
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.79	7.17E-06
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.87	3.99E-03
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	1.76	6.34E-03