Gene: AT5G63970
Gene description
TAIR ID: AT5G63970
Short description: Copine (Calcium-dependent phospholipid-binding protein) family
Pathogen responsiveness: 0.21
General responsiveness: 0.97
GO biological process
defense response to bacterium, response to wounding, jasmonic acid mediated signaling pathway
GO cellular component
plasma membrane, nucleus, cytoplasm
GO molecular function
metal ion binding, protein binding, ubiquitin-protein transferase activity
Protein domain
| Pfam | PF07002, Copine |
| Pfam | PF13920, Zinc finger, C3HC4 type (RING finger) |
| SMART | SM00327, VWA |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
22 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | 1.59 | 3.23E-03 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | 1.93 | 9.14E-04 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | 3.95 | 1.08E-12 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a 6 h | 1.77 | 5.08E-05 |
| GSE37269 | Di2, WT, control | Di2, WT, TEV 21 d | -2.17 | 4.66E-03 |
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -1.79 | 4.71E-03 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | 1.59 | 1.89E-02 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 AvrRpt2 | 1.77 | 9.85E-03 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 EV | 2.44 | 2.08E-03 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 1.89 | 2.77E-12 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | 3.81 | 4.64E-02 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | 1.99 | 2.92E-03 |
| GSE5520 | Col, WT, control 24 h | Col, WT, PstDC3000 24 h | 3.40 | 1.79E-05 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | 3.08 | 1.49E-06 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | 3.13 | 9.28E-26 |
| GSE56094 | Col, WT, control 11 h | Col, WT, PstDC3000 11 h | 2.25 | 7.98E-17 |
| GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 2.11 | 2.07E-15 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | 2.72 | 8.17E-22 |
| GSE56094 | Col, WT, control 8 h | Col, WT, PstDC3000 8 h | 1.57 | 4.77E-10 |
| GSE56094 | Col, WT, control 9 h | Col, WT, PstDC3000 9 h | 1.92 | 3.68E-13 |
| GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 2.39 | 5.38E-05 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | 1.70 | 2.69E-05 |
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