gene detail

Gene description

TAIR ID: AT5G63490

Short description: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein

Pathogen responsiveness: -0.42

General responsiveness: -2.83

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G133621

Wheat:

TA.25620.1.S1_AT TA.25620.1.S1_X_AT

GO biological process

unkown

GO cellular component

integral component of membrane

GO molecular function

unkown

Protein domain

Pfam	PF00571, CBS domain
Pfam	PF00564, PB1 domain
SMART	SM00666, PB1
SMART	SM00116, CBS

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

18 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	1.69	2.44E-08
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	1.65	2.10E-08
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.79	1.01E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.51	6.34E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.87	3.98E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.79	1.59E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.94	8.69E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.02	3.35E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.28	8.07E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.16	1.24E-14
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.67	6.53E-12
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.50	4.06E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.27	3.08E-14
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.52	3.13E-15
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	1.69	1.37E-08
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.84	4.03E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.75	9.74E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	1.55	2.50E-04