Gene: AT5G63470
     


Gene description


TAIR ID: AT5G63470

Short description: nuclear factor Y, subunit C4

Pathogen responsiveness: -1.20

General responsiveness: -0.34

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


abscisic acid-activated signaling pathway, positive regulation of protein metabolic process, regulation of transcription, DNA-templated, regulation of seed germination, negative regulation of starch metabolic process, regulation of long-day photoperiodism, flowering, gibberellic acid mediated signaling pathway, transcription, regulation of gene expression, positive regulation of photomorphogenesis


GO cellular component


cytosol, nucleus


GO molecular function


protein heterodimerization activity, transcription factor activity, sequence-specific DNA binding, DNA binding


Protein domain


PfamPF00808, Histone-like transcription factor (CBF/NF-Y) and archaeal histone

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G24050, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 22 (Top10%)

click to view PPI network

Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.602.32E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.731.19E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.048.50E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.741.05E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.252.02E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.783.54E-13
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.544.92E-03






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