gene detail

Gene description

TAIR ID: AT5G63120

Short description: P-loop containing nucleoside triphosphate hydrolases superfamily protein

Pathogen responsiveness: -2.51

General responsiveness: -3.14

Orthologous

Rice:

OS01G0911100 OS01G0197200 OS07G0301200

Maize:

GRMZM2G362850

Wheat: No orthologous gene

GO biological process

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, rRNA processing

GO cellular component

nucleus

GO molecular function

ATP binding, nucleic acid binding, helicase activity, ATP-dependent helicase activity

Protein domain

Pfam	PF00271, Helicase conserved C-terminal domain
Pfam	PF00270, DEAD/DEAH box helicase
SMART	SM00490, HELICc
SMART	SM00487, DEXDc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03040: Spliceosome

Transcriptional regulation

Regulator:
AT5G13790, AT5G61850, AT4G31800

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE13739_EDS16_GO view
GSE56094_WT_PSTDC3000 view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.87	2.52E-03