gene detail

Gene description

TAIR ID: AT5G62950

Short description: RNA polymerase II, Rpb4, core protein

Pathogen responsiveness: -2.33

General responsiveness: -1.69

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

transcription, DNA-templated

GO cellular component

plasma membrane, integral component of membrane

GO molecular function

DNA-directed 5'-3' RNA polymerase activity, nucleotide binding

Protein domain

Pfam	PF03874, RNA polymerase Rpb4
SMART	SM00657, RPOL4c

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.58	9.42E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.91	2.70E-08