Gene: AT5G62470
     


Gene description


TAIR ID: AT5G62470

Short description: myb domain protein 96

Pathogen responsiveness: -0.41

General responsiveness: -0.17

Orthologous


Rice:

OS08G0437300   OS08G0248700  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription from RNA polymerase II promoter, response to salicylic acid, regulation of transcription, DNA-templated, response to salt stress, response to water deprivation, response to abscisic acid, cell differentiation, regulation of gene expression


GO cellular component


nucleus


GO molecular function


transcription factor activity, RNA polymerase II transcription factor recruiting, sequence-specific DNA binding, DNA binding, transcription regulatory region DNA binding, RNA polymerase II transcription factor activity


Protein domain


PfamPF00249, Myb-like DNA-binding domain
SMARTSM00717, SANT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G27920, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


10 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min1.754.57E-05
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min1.912.70E-05
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.541.88E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.201.40E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.942.11E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.335.53E-10
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.752.60E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.953.43E-13
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h1.601.85E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min2.294.81E-03






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