Gene: AT5G61190
     

Gene description


TAIR ID: AT5G61190

Short description: putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain

Pathogen responsiveness: -1.13

General responsiveness: -0.92

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


chloroplast, nucleus


GO molecular function


unkown


Protein domain


PfamPF12874, Zinc-finger of C2H2 type
PfamPF01936, NYN domain
SMARTSM00451, ZnF_U1
SMARTSM00355, ZnF_C2H2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G49450, AT1G76890

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d1.621.44E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.412.26E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.092.26E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.635.57E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.914.82E-13
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.703.43E-02






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