gene detail

Gene description

TAIR ID: AT5G60100

Short description: pseudo-response regulator 3

Pathogen responsiveness: -0.11

General responsiveness: 0.20

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, transcription, negative regulation of protein binding, phosphorelay signal transduction system, regulation of circadian rhythm, rhythmic process, circadian rhythm

GO cellular component

nucleus

GO molecular function

protein binding, phosphorelay response regulator activity

Protein domain

Pfam	PF06203, CCT motif
Pfam	PF00072, Response regulator receiver domain
SMART	SM00448, REC

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04712: Circadian rhythm - plant

Transcriptional regulation

Regulator:
AT5G56110

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

12 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	5.05	1.18E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	4.77	2.03E-10
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	3.99	9.98E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	3.66	3.73E-08
GSE17464	Laer, GA+Flg22 0 h	Laer, GA+Flg22 2 h	2.19	2.90E-02
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	2.18	2.32E-03
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	1.85	1.44E-03
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	1.81	1.19E-03
GSE17464	Laer, control	Laer, PstDC3000 12 h	1.70	2.26E-02
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	1.65	2.29E-02

Showing 1 to 10 of 12 entries

Previous1 2Next