Gene: AT5G58720
     

Gene description


TAIR ID: AT5G58720

Short description: smr (Small MutS Related) domain-containing protein

Pathogen responsiveness: -1.61

General responsiveness: -2.13

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G046355  

Wheat: No orthologous gene

GO biological process


mismatch repair


GO cellular component


nucleus, cytoplasm


GO molecular function


unkown


Protein domain


PfamPF08590, Domain of unknown function (DUF1771)
SMARTSM01162, DUF1771
SMARTSM00463, SMR

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G24050, AT4G34680, AT2G45050, AT3G60530

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 25 (Top10%)

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min2.001.70E-02
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 60min1.752.83E-02
GSE17464Laer, controlLaer, Flg22 1 h2.056.63E-10
GSE17464Penta, controlPenta, Flg22 2 h2.026.32E-10






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