Gene: AT5G58470
     

Gene description


TAIR ID: AT5G58470

Short description: TBP-associated factor 15B

Pathogen responsiveness: -3.37

General responsiveness: -4.09

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G097775  

Wheat:

TA.3043.2.S1_A_AT  TA.3043.3.A1_AT  


GO biological process


regulation of transcription, DNA-templated, transcription


GO cellular component


nucleus, chloroplast


GO molecular function


metal ion binding, RNA binding


Protein domain


PfamPF00641, Zn-finger in Ran binding protein and others
PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM
SMARTSM00547, ZnF_RBZ

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G73805, AT5G26920

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view

Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.