gene detail

Gene description

TAIR ID: AT5G57090

Short description: Auxin efflux carrier family protein

Pathogen responsiveness: -1.74

General responsiveness: 1.15

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

TA.22220.1.S1_AT

GO biological process

auxin efflux, response to ethylene, response to hypoxia, auxin homeostasis, auxin polar transport, positive gravitropism, response to glucose, response to auxin, auxin-activated signaling pathway, transmembrane transport

GO cellular component

lytic vacuole, plasma membrane, integral component of membrane, basal plasma membrane, endoplasmic reticulum

GO molecular function

transporter activity, auxin:proton symporter activity, auxin efflux transmembrane transporter activity

Protein domain

Pfam	PF03547, Membrane transport protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G38250, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 13 (Top20%)

click to view PPI network

Coexpression network

GSE13739_EDS16_GO view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	3.28	1.48E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	3.05	4.18E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	2.52	7.23E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	3.34	6.10E-08