gene detail

Gene description

TAIR ID: AT5G56970

Short description: cytokinin oxidase 3

Pathogen responsiveness: -1.53

General responsiveness: -2.83

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

oxidation-reduction process, cytokinin metabolic process, cytokinin catabolic process

GO cellular component

vacuole, integral component of membrane, endoplasmic reticulum, extracellular region

GO molecular function

cytokinin dehydrogenase activity, primary amine oxidase activity, flavin adenine dinucleotide binding, oxidoreductase activity, acting on CH-OH group of donors

Protein domain

Pfam	PF01565, FAD binding domain
Pfam	PF09265, Cytokinin dehydrogenase 1, FAD and cytokinin binding

Metabolic pathway

PWY-2841: cytokinins degradation

KEGG pathway

PATH:ath00908: Zeatin biosynthesis

Transcriptional regulation

Regulator:
AT3G15270, AT2G47070, AT1G53160

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	1.65	5.92E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	2.88	1.68E-07
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.63	1.73E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.93	1.70E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.97	1.13E-13
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.66	2.62E-06
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.61	2.47E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	2.33	5.19E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	2.39	4.89E-05