Gene: AT5G55100
     

Gene description


TAIR ID: AT5G55100

Short description: SWAP (Suppressor-of-White-APricot)/surp domain-containing protein

Pathogen responsiveness: -1.25

General responsiveness: -1.53

Orthologous


Rice:

OS01G0698100  

Maize:

GRMZM2G126691  

Wheat: No orthologous gene

GO biological process


RNA processing


GO cellular component


nucleus


GO molecular function


unkown


Protein domain


PfamPF09750, Alternative splicing regulator
PfamPF01805, Surp module
SMARTSM00648, SWAP
SMARTSM01141, DRY_EERY

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G53660, AT5G11260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 1 h1.622.11E-06
GSE17464Penta, controlPenta, Flg22 2 h1.831.92E-07
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.896.27E-06
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h1.527.92E-12






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