gene detail

Gene description

TAIR ID: AT5G55040

Short description: DNA-binding bromodomain-containing protein

Pathogen responsiveness: -2.27

General responsiveness: -4.30

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

DNA binding

Protein domain

Pfam	PF00439, Bromodomain
SMART	SM00297, BROMO

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

GSE56094_WT_HRPA- view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.97	5.08E-03
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	1.62	3.65E-02
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.83	1.67E-02