Gene: AT5G54810
Gene description
TAIR ID: AT5G54810
Short description: tryptophan synthase beta-subunit 1
Pathogen responsiveness: NA
General responsiveness: NA
GO biological process
indoleacetic acid biosynthetic process, tryptophan biosynthetic process, response to salt stress, response to oxidative stress
GO cellular component
chloroplast, chloroplast stroma, plasma membrane
GO molecular function
tryptophan synthase activity
Metabolic pathway
COMPLETE-ARO-ARA-PWY: superpathway of phenylalanine, tyrosine and tryptophan biosynthesis
TRPSYN-PWY: tryptophan biosynthesis
KEGG pathway
PATH:ath01230: Biosynthesis of amino acids
PATH:ath00260: Glycine, serine and threonine metabolism
PATH:ath00400: Phenylalanine, tyrosine and tryptophan biosynthesis
click to view PPI networkCoexpression network
Differentially expressed condition 
20 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE37269 | Ei2, WT, control | Ei2, WT, TEV 21 d | -1.55 | 2.22E-02 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 1.77 | 7.93E-11 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 1.74 | 1.14E-10 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 1.93 | 1.97E-11 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 2.11 | 1.22E-13 |
| GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | 1.51 | 4.88E-08 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | 2.83 | 1.79E-13 |
| GSE56094 | Col, WT, control 10 h | Col, WT, hrpA- 10 h | 1.73 | 6.76E-06 |
| GSE56094 | Col, WT, control 11 h | Col, WT, PstDC3000 11 h | 1.82 | 7.27E-07 |
| GSE56094 | Col, WT, control 11 h | Col, WT, hrpA- 11 h | 2.15 | 3.77E-08 |
| GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 2.69 | 3.83E-12 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | 3.02 | 1.69E-14 |
| GSE56094 | Col, WT, control 13 h | Col, WT, hrpA- 13 h | 1.74 | 1.42E-05 |
| GSE56094 | Col, WT, control 6 h | Col, WT, PstDC3000 6 h | 1.51 | 1.07E-04 |
| GSE56094 | Col, WT, control 6 h | Col, WT, hrpA- 6 h | 1.50 | 2.13E-04 |
| GSE56094 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | 1.56 | 6.04E-05 |
| GSE56094 | Col, WT, control 7 h | Col, WT, hrpA- 7 h | 1.64 | 3.50E-05 |
| GSE56094 | Col, WT, control 8 h | Col, WT, PstDC3000 8 h | 2.30 | 1.64E-09 |
| GSE56094 | Col, WT, control 8 h | Col, WT, hrpA- 8 h | 1.67 | 1.32E-05 |
| GSE56094 | Col, WT, control 9 h | Col, WT, PstDC3000 9 h | 1.99 | 1.31E-07 |
Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.