gene detail

Gene description

TAIR ID: AT5G54720

Short description: Ankyrin repeat family protein

Pathogen responsiveness: 0.46

General responsiveness: -1.96

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

Gene Ontology

No GO annotation

Protein domain

Pfam	PF12796, Ankyrin repeats (3 copies)
SMART	SM00248, ANK

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G62300, AT5G41315, AT4G31550

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

26 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	1.94	5.12E-08
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	2.66	2.34E-09
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 30 min	2.30	2.78E-02
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	2.00	3.04E-02
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.67	1.23E-03
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.38	2.17E-05
GSE2169	Col, WT, water	Col, WT, chitin 30 min	2.22	3.22E-06
GSE2169	Col, rre1, water	Col, rre1, chitin 30 min	2.04	9.07E-06
GSE2169	Col, rre2, water	Col, rre2, chitin 30 min	2.47	4.50E-07
GSE2538	Col, WT, control	Col, WT, crab shell chitin 30 min	2.21	1.76E-02
GSE37269	Oy0, WT, control	Oy0, WT, TEV 21 d	2.66	1.11E-02
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-1.72	3.79E-02
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.72	1.20E-12
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.49	1.81E-12
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.54	2.36E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	3.39	1.04E-12
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	2.84	5.43E-11
GSE4746	Col, WT, water 30 min	Col, WT, chitooctaose 30 min	3.11	7.96E-04
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.16	5.14E-09
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	3.23	2.43E-11
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.71	2.50E-02
GSE56094	Col, WT, control 3 h	Col, WT, hrpA- 3 h	1.62	8.35E-10
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	2.25	3.73E-06
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	3.01	1.17E-08
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.47	1.47E-03
GSE8319	Col, WT, control	Col, WT, chitooctaose 30 min	2.97	2.49E-11