Gene: AT5G54230
     


Gene description


TAIR ID: AT5G54230

Short description: myb domain protein 49

Pathogen responsiveness: -2.43

General responsiveness: 1.23

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription from RNA polymerase II promoter, regulation of transcription, DNA-templated, response to salt stress, response to salicylic acid, cell differentiation, response to abscisic acid


GO cellular component


nucleus


GO molecular function


RNA polymerase II transcription factor activity, sequence-specific DNA binding, transcription factor activity, RNA polymerase II transcription factor recruiting, transcription regulatory region DNA binding


Protein domain


PfamPF00249, Myb-like DNA-binding domain
SMARTSM00717, SANT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G31800

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 29 (Top5%)

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.074.65E-02
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h2.323.80E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.061.12E-02






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