Gene: AT5G53060
     


Gene description


TAIR ID: AT5G53060

Short description: RNA-binding KH domain-containing protein

Pathogen responsiveness: -2.95

General responsiveness: -2.18

Orthologous


Rice:

OS06G0342500  

Maize:

GRMZM2G057743  

Wheat: No orthologous gene

GO biological process


regulation of defense response to fungus, mRNA processing, primary miRNA processing, response to osmotic stress, jasmonic acid mediated signaling pathway, RNA splicing, heat acclimation, regulation of gene expression


GO cellular component


nuclear dicing body, nuclear speck, integral component of membrane, nucleus


GO molecular function


protein binding, RNA binding


Protein domain


PfamPF00013, KH domain
SMARTSM00322, KH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G73805, AT5G26920, AT3G19290, AT1G45249

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 11 (Top20%)

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.