Gene: AT5G52630
     

Gene description


TAIR ID: AT5G52630

Short description: mitochondrial RNAediting factor 1

Pathogen responsiveness: -2.27

General responsiveness: -2.03

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G020008  

Wheat: No orthologous gene

GO biological process


cytidine to uridine editing


GO cellular component


mitochondrion, intracellular membrane-bounded organelle


GO molecular function


zinc ion binding, endonuclease activity, RNA binding


Protein domain


PfamPF13041, PPR repeat family
PfamPF01535, PPR repeat
PfamPF14432, DYW family of nucleic acid deaminases

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G16110, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.898.77E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.944.26E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.542.75E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.011.46E-10
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.804.39E-03






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