gene detail

Gene description

TAIR ID: AT5G52450

Short description: MATE efflux family protein

Pathogen responsiveness: -0.27

General responsiveness: -0.82

Orthologous

Rice:

Maize:

Wheat:

GO biological process

response to nematode

GO cellular component

vacuolar membrane, integral component of membrane, plasma membrane, membrane

GO molecular function

transporter activity, antiporter activity

Protein domain

Pfam	PF01554, MatE

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G38250, AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

16 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	1.73	6.92E-08
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.73	1.69E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	2.26	1.17E-09
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	2.02	7.28E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	2.23	1.36E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.42	1.76E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	1.88	1.75E-07
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.11	1.87E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	1.59	2.18E-04
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.06	4.43E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.28	1.25E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.73	4.95E-10
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.51	9.49E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.23	1.13E-12
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	3.46	5.85E-08
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	1.54	4.29E-04