gene detail

Gene description

TAIR ID: AT5G50670

Short description: Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice:

OS08G0531600

Maize:

GRMZM2G061734

Wheat:

TAAFFX.4913.1.S1_AT

GO biological process

anther development

GO cellular component

nucleus

GO molecular function

unkown

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	2.23	1.93E-07
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	2.23	1.26E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.68	3.49E-11
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.21	4.14E-12
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.80	3.66E-14